DisGeNET - a database of gene-disease associations

List of shared variants

Prostate carcinoma, C0600139

Disease: Malignant tumor of colon

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1052133	OGG1 ; CAMK1	0.476	0.800	3	9757089	missense variant	C/G	snv	0.27	0.22	147
rs1805087	MTR	0.496	0.800	1	236885200	missense variant	A/G	snv	0.20	0.21	135
rs11119608	KCNH1	0.708	0.280	1	210816167	intron variant	T/G	snv		0.21	17
rs1800566	NQO1	0.576	0.680	16	69711242	missense variant	G/A	snv	0.25	0.21	59
rs10759932	TLR4	0.732	0.560	9	117702866	upstream gene variant	T/C	snv		0.18	15
rs9651118	MTHFR	0.683	0.480	1	11802157	intron variant	T/C	snv		0.18	20
rs2228480	ESR1	0.724	0.360	6	152098960	synonymous variant	G/A	snv	0.19	0.18	16
rs2297518	NOS2	0.658	0.480	17	27769571	missense variant	G/A	snv	0.18	0.17	30
rs1136410	PARP1	0.559	0.760	1	226367601	missense variant	A/G	snv	0.21	0.15	70
rs12917	MGMT ; LOC105378560	0.605	0.480	10	129708019	missense variant	C/T	snv	0.14	0.14	45
rs73110464	KRT8	0.708	0.280	12	52918828	intron variant	C/T	snv		0.12	17
rs2270916	CASR	0.851	0.120	3	122282252	intron variant	T/C	snv	0.13	0.11	6
rs1801725	CASR	0.633	0.600	3	122284910	missense variant	G/T	snv	0.13	0.11	39
rs1042636	CASR	0.672	0.360	3	122284922	missense variant	A/G	snv	0.15	9.0E-02	23
rs1801282	PPARG	0.500	0.840	3	12351626	missense variant	C/G	snv	0.11	8.9E-02	131
rs3742330	DICER1	0.662	0.640	14	95087025	3 prime UTR variant	A/G	snv		8.7E-02	24
rs1799782	XRCC1	0.474	0.800	19	43553422	missense variant	G/A	snv	9.5E-02	7.0E-02	151
rs75316749	LOC107986051	0.701	0.280	3	169043635	intergenic variant	A/G	snv		4.2E-02	18
rs56404467	FRY	0.708	0.280	13	32265853	intron variant	G/A	snv		1.3E-02	17
rs148883465		0.708	0.280	11	103813371	intron variant	A/G	snv		7.2E-03	17
rs186507655		0.708	0.280	1	1351675	upstream gene variant	G/A	snv		6.8E-03	17
rs11571818	BRCA2	0.708	0.280	13	32394673	intron variant	T/C	snv	6.6E-03	6.0E-03	17
rs11571833	BRCA2	0.608	0.360	13	32398489	stop gained	A/T	snv	6.6E-03	6.0E-03	43
rs141752671		0.708	0.280	11	103745837	intron variant	A/G	snv		5.4E-03	17
rs56084662	FRY	0.701	0.280	13	32295727	3 prime UTR variant	G/A	snv		3.5E-03	18